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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_19456019_19456349_F

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
19456019 - 19456349
Intron Length:
331

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CTT|GTAAGTATA
5'SS Class:
major
3'SS Sequence:
ATGCTTCTTTTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTGAT
U12 Branch Point Sequence:
TTGTTTTTGATG
Flanking Amino Acid:
PLYRELQFLLTLAEGLKTGV
Intron Amino Acid Position:
313

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.2
0.69
1
81.8
31
Major BPS
96.4
1.15
0.6
85.7
34.9
Major PPT
76.5
0.6
0.8
74.3
35.9
Minor 5ss
41.9
-0.9
2.8
57.3
41.2
Minor BPS
63.1
0.27
1.3
64.84
38.1

Associated Gene:

Gene:
ZWILCH
Ensembl Gene ID:
ENSAPLG00000000968
Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000001168
19452232 - 19462783
10552