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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_19457353_19458217_F

Intron Information:

Intron Rank:
10
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
19457353 - 19458217
Intron Length:
865

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTATGTGCA
5'SS Class:
strong_major
3'SS Sequence:
TAAACTCTTTCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTTAC
U12 Branch Point Sequence:
TTTTACTTAAAC
Flanking Amino Acid:
CTSGNENGTENIKSDTAAVD
Intron Amino Acid Position:
362

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
87.5
0.88
0.9
76.8
31.8
Major BPS
86.6
0.91
0.8
77.7
36.7
Major PPT
74.4
0.55
0.9
70.3
40.6
Minor 5ss
39.1
-1.2
3
50.2
46.2
Minor BPS
75.5
0.78
1.5
85.19
32.4

Associated Gene:

Gene:
ZWILCH
Ensembl Gene ID:
ENSAPLG00000000968
Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000001168
19452232 - 19462783
10552