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Intron Name: Anas_platyrhynchos_platyrhynchos_11_19465921_19470005_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19465921 - 19470005

Intron Length:

4085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAC

U12 Branch Point Sequence:

TTTAACAGAATA

Flanking Amino Acid:

WPRIMPTGIKTLNDGVNVRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

74.4

Major BPS

71.9

0.54

1.2

75.6

36.6

Major PPT

82.5

0.73

0.9

75.8

38.2

Minor 5ss

41.4

-1

2.8

50.4

39.9

Minor BPS

48.4

-0.1

1.9

67.62

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031372

19465047 - 19472732

7686