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Intron Name: Anas_platyrhynchos_platyrhynchos_11_19642824_19645200_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19642824 - 19645200

Intron Length:

2377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

ACAACACTAACG

Flanking Amino Acid:

PYHFSRLCGPESPPPPYSRL

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

64.5

0.36

65.2

28.2

Major PPT

90.3

0.91

0.6

83.6

31.5

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

45.4

-0.4

49.92

43.1

Associated Gene:

Gene:

SMAD6

Ensembl Gene ID:

ENSAPLG00000000997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000979

19641950 - 19673928

31979