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Intron Name: Anas_platyrhynchos_platyrhynchos_11_19645258_19646439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19645258 - 19646439

Intron Length:

1182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACGTGCC

5'SS Class:

major

3'SS Sequence:

TGTCTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAA

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

LSPNDEQKPLDLSDSTLSYT

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

66.9

39.9

Major BPS

64.3

0.36

71.3

30.3

Major PPT

86.1

0.81

0.8

80.7

31.3

Minor 5ss

32.4

-2

3.3

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

SMAD6

Ensembl Gene ID:

ENSAPLG00000000997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000979

19641950 - 19673928

31979