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Intron Name: Anas_platyrhynchos_platyrhynchos_11_19777057_19828650_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19777057 - 19828650

Intron Length:

51594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TACATTGTAATC

Flanking Amino Acid:

NINTKCITIPRSLDGRLQVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

36.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

0.61

0.9

69.9

36.6

Minor 5ss

32.2

-2

39.4

46.1

Minor BPS

46.4

-0.2

1.9

54.92

Associated Gene:

Gene:

SMAD3

Ensembl Gene ID:

ENSAPLG00000007006

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007297

19776851 - 19846310

69460