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Intron Name: Anas_platyrhynchos_platyrhynchos_11_19856593_19857117_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
19856593 - 19857117

Intron Length:
525

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAA|GTAAACAGT

5'SS Class:
major

3'SS Sequence:
TGTTTCCCGACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGTAAT

U12 Branch Point Sequence:
GTTCCTGTAATA

Flanking Amino Acid:
IGSEENQDTESNPSAADREE

Intron Amino Acid Position:
207

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.9
0.49
1.1
68.8
42.1

Major BPS
72.1
0.55
1.2
73.3
39.1

Major PPT
74
0.54
1
69.7
36.8

Minor 5ss
42.2
-0.9
3
57.4
41.5

Minor BPS
54.8
0.15
2
69.24
37.4

Associated Gene:

Gene:
AAGAB

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19853217 - 19871425
18209