Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_19890699_19891937_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19890699 - 19891937

Intron Length:

1239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTGGA

5'SS Class:

major

3'SS Sequence:

GTCTCCATGTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

GCCCCCATAAAG

Flanking Amino Acid:

SELQTPSQTQSLQDPSFDCD

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

66.9

38.5

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

0.4

66.3

39.5

Minor 5ss

38.2

-1.3

3.1

46.2

Minor BPS

46.8

-0.3

1.8

48.07

44.5

Associated Gene:

Gene:

IQCH

Ensembl Gene ID:

ENSAPLG00000007592

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007882

19872989 - 19936660

63672