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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1992266_1992550_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1992266 - 1992550

Intron Length:
285

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTGGTTTG

5'SS Class:
major

3'SS Sequence:
AATCTCTTTTAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAATAAT

U12 Branch Point Sequence:
TATCAAGTAACT

Flanking Amino Acid:
NARIVKWSDGSMSLHLGNEV

Intron Amino Acid Position:
442

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.5
0.58
1.2
70.9
41.9

Major BPS
80
0.75
1
78.6
31

Major PPT
69.7
0.44
1.1
72.4
37.1

Minor 5ss
38.8
-1.3
3
49.5
46.8

Minor BPS
46.8
-0.1
2.3
73.45
42.4

Associated Gene:

Gene:
LEO1

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1983374 - 1997900
14527

1986997 - 1997900
10904