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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1992686_1993261_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1992686 - 1993261

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACATG

5'SS Class:

strong_major

3'SS Sequence:

AATTCTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

AAGTATTTAACC

Flanking Amino Acid:

QAVFKTKLTFRPHSTDSATH

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

75.1

41.1

Major BPS

79.5

0.73

0.9

36.9

Major PPT

69.5

0.44

63.7

37.2

Minor 5ss

42.3

-0.8

56.9

47.4

Minor BPS

63.3

0.4

1.5

38.3

Associated Gene:

Gene:

LEO1

Ensembl Gene ID:

ENSAPLG00000009700

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010110

1983374 - 1997900

14527

ENSAPLT00000025051

1986997 - 1997900

10904