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Intron Name: Anas_platyrhynchos_platyrhynchos_11_19927552_19930513_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19927552 - 19930513

Intron Length:

2962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGCAGT

5'SS Class:

major

3'SS Sequence:

TTGTTTTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGTAT

U12 Branch Point Sequence:

ATGTCGTGAAAA

Flanking Amino Acid:

QCTQHKETKTPSPGSNRCAV

Intron Amino Acid Position:

844

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.2

45.2

Major BPS

59.2

0.23

1.4

61.1

45.5

Major PPT

85.8

0.81

0.7

85.6

29.2

Minor 5ss

-0.6

67.7

Minor BPS

48.2

-0.1

2.2

64.13

41.8

Associated Gene:

Gene:

IQCH

Ensembl Gene ID:

ENSAPLG00000007592

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007882

19872989 - 19936660

63672