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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20110939_20115794_F

Intron Information:

Intron Rank:

145821

Intron Class:

major

Intron Phase:

Intron Coordinates:

20110939 - 20115794

Intron Length:

4856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGCGC

5'SS Class:

major

3'SS Sequence:

GGTTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACGGAT

U12 Branch Point Sequence:

TGGCTGGGAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.1

53.2

40.6

Major BPS

49.9

-0

1.3

49.1

Major PPT

80.1

0.68

0.9

73.4

Minor 5ss

29.1

-2.4

3.6

41.4

45.3

Minor BPS

33.7

-1.2

2.3

42.18

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018351

20110681 - 20116015

5335