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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20144979_20147321_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20144979 - 20147321

Intron Length:

2343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGCC

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTTTAAAGT

Flanking Amino Acid:

LTDFGMSASEASDNSQRFRE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

66.9

37.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

84.1

0.77

0.7

77.3

31.4

Minor 5ss

37.2

-1.4

3.4

51.6

45.1

Minor BPS

54.4

0.22

1.9

75.46

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002561

20144858 - 20166318

21461