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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20149629_20150228_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20149629 - 20150228

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAAG

5'SS Class:

major

3'SS Sequence:

CTTTGATTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

AGTACTTTGATT

Flanking Amino Acid:

KVNGKPCSLPGYLPPTKNGV

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

39.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

78.9

0.65

0.9

73.1

36.2

Minor 5ss

37.3

-1.4

2.8

48.1

41.6

Minor BPS

64.1

0.53

1.2

74.6

36.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002561

20144858 - 20166318

21461