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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20165502_20166062_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20165502 - 20166062

Intron Length:

561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATCATAC

5'SS Class:

weak_major

3'SS Sequence:

CCTCTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTACCAT

U12 Branch Point Sequence:

TGTTCCGTACCA

Flanking Amino Acid:

RSSTDTASIFGQPFRTVFCH

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.1

0.29

1.2

57.4

36.4

Major BPS

49.1

-0

1.5

60.8

45.4

Major PPT

81.5

0.71

0.8

75.6

32.8

Minor 5ss

50.1

0.01

2.5

64.4

42.5

Minor BPS

56.9

0.21

2.3

75.93

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002561

20144858 - 20166318

21461