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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20170456_20172592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20170456 - 20172592

Intron Length:

2137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTCAC

5'SS Class:

major

3'SS Sequence:

TGCTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

ATCTTTGTATTT

Flanking Amino Acid:

NLGEKLSEEEVDDLLKEAKI

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

66.9

38.5

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

86.6

0.82

0.7

84.6

30.4

Minor 5ss

40.7

-1

2.8

52.9

44.2

Minor BPS

45.6

-0.2

2.1

64.63

41.3

Associated Gene:

Gene:

CALML4

Ensembl Gene ID:

ENSAPLG00000003092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003137

20170147 - 20174204

4058