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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20173966_20174075_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20173966 - 20174075

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCGCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCGC

U12 Branch Point Sequence:

TCTCCCTTTTTT

Flanking Amino Acid:

LKHTERHKIMAKFLSQDQIN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

35.6

-0.9

4.2

77.4

37.4

Major PPT

86.4

0.82

0.8

81.5

30.6

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

-0.4

3.6

73.22

43.8

Associated Gene:

Gene:

CALML4

Ensembl Gene ID:

ENSAPLG00000003092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003137

20170147 - 20174204

4058