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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20177765_20177875_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20177765 - 20177875

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAGAGG

5'SS Class:

major

3'SS Sequence:

CGTTGCATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GCCCTTTTAAAT

Flanking Amino Acid:

IIKNLKPETLIDSFELLYYY

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

59.4

44.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

73.9

0.54

66.2

39.5

Minor 5ss

31.2

-2.2

3.2

36.5

42.7

Minor BPS

0.17

1.4

62.52

41.7

Associated Gene:

Gene:

CLN6

Ensembl Gene ID:

ENSAPLG00000003181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003248

20174992 - 20181703

6712