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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20197768_20197988_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20197768 - 20197988

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAG

5'SS Class:

strong_major

3'SS Sequence:

GTGCTCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGCAT

U12 Branch Point Sequence:

GCATCCCCACCA

Flanking Amino Acid:

VFREEDPSRQITFEISKPEE

Intron Amino Acid Position:

1131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

64.9

42.8

Major BPS

50.7

0.02

1.5

44.2

Major PPT

79.2

0.66

0.9

37.3

Minor 5ss

31.8

-2.1

37.6

47.1

Minor BPS

-0.4

2.1

54.21

43.8

Associated Gene:

Gene:

ITGA11

Ensembl Gene ID:

ENSAPLG00000003663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029813

20194956 - 20234305

39350

ENSAPLT00000003838

20193084 - 20234305

41222