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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20198085_20198410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20198085 - 20198410

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

TCTCTTTGTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

TGGTGCTCAGCT

Flanking Amino Acid:

GNLWMKSLKALKFKSLKLTT

Intron Amino Acid Position:

1099

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

69.4

41.2

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

83.5

0.75

0.8

79.9

32.1

Minor 5ss

39.1

-1.2

57.4

40.4

Minor BPS

47.5

-0.1

2.2

69.1

47.2

Associated Gene:

Gene:

ITGA11

Ensembl Gene ID:

ENSAPLG00000003663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003838

20193084 - 20234305

41222

ENSAPLT00000029813

20194956 - 20234305

39350