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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20199727_20200845_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20199727 - 20200845

Intron Length:

1119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TCGGTCACAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATCAC

U12 Branch Point Sequence:

TCGGTCACAACA

Flanking Amino Acid:

LKYEADLLFTRVSSLDYYEI

Intron Amino Acid Position:

964

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

53.4

0.09

1.1

57.3

37.7

Major PPT

61.9

0.27

55.6

38.9

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

45.7

-0.3

1.9

55.65

43.6

Associated Gene:

Gene:

ITGA11

Ensembl Gene ID:

ENSAPLG00000003663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029813

20194956 - 20234305

39350

ENSAPLT00000003838

20193084 - 20234305

41222