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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20200936_20201767_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20200936 - 20201767

Intron Length:

832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCACGCT

5'SS Class:

weak_major

3'SS Sequence:

GCTGGTGTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

AGGTGCTCACCC

Flanking Amino Acid:

QSMEIYLTANSDSEEKESTK

Intron Amino Acid Position:

934

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.3

55.3

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

69.9

0.45

64.9

45.7

Minor 5ss

33.6

-1.9

3.5

48.9

46.9

Minor BPS

44.1

-0.4

2.1

53.63

Associated Gene:

Gene:

ITGA11

Ensembl Gene ID:

ENSAPLG00000003663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029813

20194956 - 20234305

39350

ENSAPLT00000003838

20193084 - 20234305

41222