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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20201845_20202742_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20201845 - 20202742

Intron Length:

898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

CCAACCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAATAT

U12 Branch Point Sequence:

TTTCTCCCATCT

Flanking Amino Acid:

SYPFFRAKAKVAFRLDFEFS

Intron Amino Acid Position:

909

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

67.5

0.44

1.1

63.7

42.3

Major PPT

62.1

0.27

0.9

54.2

30.5

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

47.2

-0.1

2.1

74.41

Associated Gene:

Gene:

ITGA11

Ensembl Gene ID:

ENSAPLG00000003663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029813

20194956 - 20234305

39350

ENSAPLT00000003838

20193084 - 20234305

41222