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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20208147_20208804_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20208147 - 20208804

Intron Length:

658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTAGCTGC

5'SS Class:

major

3'SS Sequence:

CTCACCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CCTCGCTCACCC

Flanking Amino Acid:

VGSLGNAVLLWSRSVVQINA

Intron Amino Acid Position:

637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

57.9

42.1

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

67.9

0.4

0.8

Minor 5ss

40.7

-1

2.8

48.8

41.7

Minor BPS

42.5

-0.5

2.1

51.58

45.7

Associated Gene:

Gene:

ITGA11

Ensembl Gene ID:

ENSAPLG00000003663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029813

20194956 - 20234305

39350

ENSAPLT00000003838

20193084 - 20234305

41222