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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20209694_20210231_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20209694 - 20210231

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTTATCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCCCCTTTTATC

Flanking Amino Acid:

GKVYVYALRENRFVSSGALG

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

72.5

38.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

78.8

0.65

0.8

70.5

36.1

Minor 5ss

31.5

-2.1

3.2

40.8

45.2

Minor BPS

51.7

0.04

1.6

59.23

40.5

Associated Gene:

Gene:

ITGA11

Ensembl Gene ID:

ENSAPLG00000003663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029813

20194956 - 20234305

39350

ENSAPLT00000003838

20193084 - 20234305

41222