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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20213909_20214062_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20213909 - 20214062

Intron Length:

154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCAACCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAA

U12 Branch Point Sequence:

CCTCTCCCAACC

Flanking Amino Acid:

KDNVTRYAVAVLGYYNRRGI

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

50.7

0.02

1.2

62.1

35.8

Major PPT

64.9

0.34

0.9

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

46.3

-0.3

1.9

56.28

42.1

Associated Gene:

Gene:

ITGA11

Ensembl Gene ID:

ENSAPLG00000003663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029813

20194956 - 20234305

39350

ENSAPLT00000003838

20193084 - 20234305

41222