Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_20215054_20215951_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20215054 - 20215951

Intron Length:

898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCCCG

5'SS Class:

major

3'SS Sequence:

CTGTACTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTAC

U12 Branch Point Sequence:

CTGTCTGTACTC

Flanking Amino Acid:

KFYIGPGQIQVGVVQYGEDV

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

44.9

Major BPS

49.6

-0

1.4

51.3

43.9

Major PPT

71.1

0.47

0.9

61.9

39.6

Minor 5ss

39.9

-1.1

49.4

40.7

Minor BPS

45.5

-0.3

2.2

56.79

43.2

Associated Gene:

Gene:

ITGA11

Ensembl Gene ID:

ENSAPLG00000003663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029813

20194956 - 20234305

39350

ENSAPLT00000003838

20193084 - 20234305

41222