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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20217116_20217373_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20217116 - 20217373

Intron Length:

258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGGCC

5'SS Class:

major

3'SS Sequence:

TGGTTTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CCATCCCTGATG

Flanking Amino Acid:

ATNPKDSSFLACSPLWSHEC

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

64.2

35.7

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

77.1

0.61

0.9

69.5

41.6

Minor 5ss

25.2

-2.9

3.3

37.1

Minor BPS

-0.2

1.8

51.55

43.4

Associated Gene:

Gene:

ITGA11

Ensembl Gene ID:

ENSAPLG00000003663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029813

20194956 - 20234305

39350

ENSAPLT00000003838

20193084 - 20234305

41222