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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20260506_20260638_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
20260506 - 20260638

Intron Length:
133

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAATAAA

5'SS Class:
strong_major

3'SS Sequence:
ATGTGCCTTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTGAT

U12 Branch Point Sequence:
TTGCACTAAAAA

Flanking Amino Acid:
NLPKLNKLKKLELSDNRISG

Intron Amino Acid Position:
69

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.4
0.91
0.8
85.6
24.6

Major BPS
81.2
0.78
1.1
71.4
45.1

Major PPT
75.1
0.57
0.9
70.5
40.6

Minor 5ss
34.4
-1.8
2.8
41.8
44.8

Minor BPS
48.5
-0.1
1.9
63.3
42.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20255357 - 20273316
17960

20255357 - 20273316
17960