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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20306993_20307374_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20306993 - 20307374

Intron Length:

382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

GAGAGGTGCCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TCGCTTTTACCC

Flanking Amino Acid:

RFLFQVYDVDARGGSSGAID

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

36.3

Major BPS

74.2

0.6

39.4

Major PPT

44.2

-0.3

1.1

29.4

Minor 5ss

37.4

-1.4

44.6

45.1

Minor BPS

50.4

-0

1.6

58.36

41.3

Associated Gene:

Gene:

NOX5

Ensembl Gene ID:

ENSAPLG00000005589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005776

20301648 - 20313760

12113