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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20358688_20361675_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20358688 - 20361675

Intron Length:

2988

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAC

U12 Branch Point Sequence:

TTACGGCTGACA

Flanking Amino Acid:

FTSVKQFVAPENTEGVSLQL

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

80.1

30.7

Major BPS

56.2

0.16

1.3

51.3

43.9

Major PPT

86.2

0.81

0.8

80.6

Minor 5ss

-1.7

3.2

48.2

47.9

Minor BPS

40.2

-0.7

2.5

57.55

41.6

Associated Gene:

Gene:

GLCE

Ensembl Gene ID:

ENSAPLG00000005999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042539

20330210 - 20362779

32570

ENSAPLT00000006219

20331508 - 20362700

31193