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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20374147_20377541_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20374147 - 20377541

Intron Length:

3395

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCTGGTGAC

5'SS Class:

major

3'SS Sequence:

GCGCCGGTCAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTTAT

U12 Branch Point Sequence:

ATTTGGTTATTT

Flanking Amino Acid:

ALSMYSLGKGVRHSLKAASH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.4

43.3

Major BPS

66.2

0.4

1.3

57.4

49.1

Major PPT

48.3

-0.1

1.1

42.8

36.5

Minor 5ss

18.1

-3.7

3.7

27.1

36.7

Minor BPS

46.7

-0.1

2.5

73.74

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029104

20374071 - 20377819

3749