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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20619667_20621734_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20619667 - 20621734

Intron Length:

2068

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCCAGGGCC

5'SS Class:

major

3'SS Sequence:

CAGGGGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTCAT

U12 Branch Point Sequence:

TTGCGGTTCATT

Flanking Amino Acid:

AARELRVLLAKKYSNAGHVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.2

73.9

29.3

Major BPS

0.42

1.4

71.4

45.1

Major PPT

0.23

1.1

50.2

43.6

Minor 5ss

17.3

-3.8

3.8

25.3

29.3

Minor BPS

41.5

-0.5

2.6

64.52

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048310

20617680 - 20621798

4119