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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20723116_20724191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20723116 - 20724191

Intron Length:

1076

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAT

5'SS Class:

strong_major

3'SS Sequence:

AATTTATCTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTGTGCCAATT

Flanking Amino Acid:

QGQVFAVESQSRSMLRPLEL

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

82.6

29.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

0.65

0.9

75.2

Minor 5ss

35.2

-1.7

49.1

46.7

Minor BPS

42.3

-0.5

2.4

43.5

Associated Gene:

Gene:

UACA

Ensembl Gene ID:

ENSAPLG00000004038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024087

20717596 - 20746317

28722

ENSAPLT00000004212

20717596 - 20736523

18928

ENSAPLT00000044372

20717596 - 20736523

18928