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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20724896_20725084_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20724896 - 20725084

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTACGTTAA

5'SS Class:

major

3'SS Sequence:

TGTTTGCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTTTTGTATTT

Flanking Amino Acid:

ALKAKLKYYEVDFVTSGSNF

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

74.1

32.5

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

80.2

0.68

0.8

77.9

36.6

Minor 5ss

40.2

-1.1

48.5

42.1

Minor BPS

50.7

0.1

2.2

78.46

Associated Gene:

Gene:

UACA

Ensembl Gene ID:

ENSAPLG00000004038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004212

20717596 - 20736523

18928

ENSAPLT00000044372

20717596 - 20736523

18928

ENSAPLT00000024087

20717596 - 20746317

28722