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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20729192_20730135_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20729192 - 20730135

Intron Length:

944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

TCCCCATCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

CGTCTCTGAATG

Flanking Amino Acid:

ADVNARDKQNRTALMLGCEY

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.6

37.2

Major BPS

69.8

0.49

37.5

Major PPT

72.2

0.5

0.8

69.2

30.2

Minor 5ss

32.4

-2

3.4

46.7

48.6

Minor BPS

51.1

-0.1

1.5

54.05

41.1

Associated Gene:

Gene:

UACA

Ensembl Gene ID:

ENSAPLG00000004038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024087

20717596 - 20746317

28722

ENSAPLT00000004212

20717596 - 20736523

18928

ENSAPLT00000044372

20717596 - 20736523

18928