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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20793761_20794541_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
20793761 - 20794541

Intron Length:
781

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGACGA

5'SS Class:
strong_major

3'SS Sequence:
ATTGTTTTGACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
AGACTTTTAATT

Flanking Amino Acid:
VRLILLETEEEDLKISHHAD

Intron Amino Acid Position:
49

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.6
0.91
0.9
71.7
40.1

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
76.4
0.59
1
72.7
41.8

Minor 5ss
31.3
-2.1
3
39.6
45.7

Minor BPS
61.1
0.43
1.2
69.05
35.7

Associated Gene:

Gene:
ADAMTS7

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20792297 - 20826867
34571

20792297 - 20827179
34883