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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20794667_20795773_F


Intron Information:

Intron Rank:
3

Intron Class:
major-like

Intron Phase:
2

Intron Coordinates:
20794667 - 20795773

Intron Length:
1107

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTGTGC

5'SS Class:
major

3'SS Sequence:
TCCAATCACCAAG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TTCCAAT

U12 Branch Point Sequence:
TTGTTTCCAATC

Flanking Amino Acid:
LHHDVAVLLTRKDICAAMNR

Intron Amino Acid Position:
90

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.4
0.48
1.1
59.4
40.4

Major BPS
71.8
0.54
1.2
79
32.5

Major PPT
51.8
0.04
1.1
48.9
38.3

Minor 5ss
43.2
-0.7
3.1
59.3
45.4

Minor BPS
48.3
-0.1
1.8
62.38
37.7

Associated Gene:

Gene:
ADAMTS7

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20792297 - 20826867
34571

20792297 - 20827179
34883