Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_20801275_20803596_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20801275 - 20803596

Intron Length:

2322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGAG

5'SS Class:

major

3'SS Sequence:

CTCCCGCGAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

ACTGTGTTAATT

Flanking Amino Acid:

QSAERQCSSPTPKYGGRYCL

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.3

72.3

39.5

Major BPS

84.4

0.85

34.5

Major PPT

0.2

53.4

35.4

Minor 5ss

33.4

-1.9

3.2

39.4

39.8

Minor BPS

49.8

0.07

2.1

68.91

Associated Gene:

Gene:

ADAMTS7

Ensembl Gene ID:

ENSAPLG00000009285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009766

20792297 - 20827179

34883

ENSAPLT00000044815

20792297 - 20826867

34571