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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20841260_20842417_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20841260 - 20842417

Intron Length:

1158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTTTCTTCAAAC

Flanking Amino Acid:

VPHCSLATLIGLCLRIKLQR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

78.2

0.7

79.9

32.6

Major PPT

77.3

0.61

0.9

74.4

34.2

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

68.7

0.57

1.6

80.07

34.5

Associated Gene:

Gene:

CIAO2A

Ensembl Gene ID:

ENSAPLG00000009207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009578

20838842 - 20842622

3781