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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20846798_20847515_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20846798 - 20847515

Intron Length:

718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGACTG

5'SS Class:

major

3'SS Sequence:

AAAATGGGGAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

GCATCCAGAACT

Flanking Amino Acid:

VLAESKVDKHAEYC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.2

58.5

46.1

Major BPS

65.3

0.38

71.6

30.1

Major PPT

42.4

-0.4

1.2

29.4

40.3

Minor 5ss

30.5

-2.2

3.3

39.1

46.1

Minor BPS

55.4

0.25

1.8

72.1

43.8

Associated Gene:

Gene:

SPG11

Ensembl Gene ID:

ENSAPLG00000008622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009035

20846784 - 20881564

34781