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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20873146_20874464_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20873146 - 20874464

Intron Length:

1319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTATC

5'SS Class:

strong_major

3'SS Sequence:

GTGTATTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TACCTTCTAAGT

Flanking Amino Acid:

QVLCLYELSKELNCSYSEMS

Intron Amino Acid Position:

1914

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

27.8

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

71.7

0.49

0.9

69.7

41.2

Minor 5ss

46.4

-0.4

2.5

62.6

42.2

Minor BPS

-0.2

1.9

62.44

41.8

Associated Gene:

Gene:

SPG11

Ensembl Gene ID:

ENSAPLG00000008622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009035

20846784 - 20881564

34781