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Intron Name: Anas_platyrhynchos_platyrhynchos_11_20915317_20917523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20915317 - 20917523

Intron Length:

2207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

RVRRKSQVNGEAGSYEMTNQ

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

77.1

32.8

Major BPS

78.6

0.71

79.6

32.9

Major PPT

95.6

1.03

0.5

91.4

20.1

Minor 5ss

37.5

-1.4

2.4

42.6

44.3

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

CTDSPL2

Ensembl Gene ID:

ENSAPLG00000007949

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008308

20901667 - 20921314

19648