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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21046217_21058557_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21046217 - 21058557

Intron Length:

12341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

TGCTCTGTAAAT

Flanking Amino Acid:

MRDAKGQYLFD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

86.2

0.81

0.8

80.6

31.4

Minor 5ss

29.1

-2.4

3.2

37.3

42.5

Minor BPS

52.7

0.16

2.1

73.53

43.4

Associated Gene:

Gene:

FRMD5

Ensembl Gene ID:

ENSAPLG00000007330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040068

21046214 - 21072784

26571