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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21058663_21059741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21058663 - 21059741

Intron Length:

1079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAA

U12 Branch Point Sequence:

CTGAGCTGACTA

Flanking Amino Acid:

IRFVDPDKQRHWLEFTKSVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.1

34.7

Major BPS

59.8

0.24

1.2

61.9

33.9

Major PPT

83.4

0.75

0.7

80.4

24.9

Minor 5ss

27.1

-2.6

2.9

24.2

36.8

Minor BPS

41.1

-0.6

48.2

42.8

Associated Gene:

Gene:

FRMD5

Ensembl Gene ID:

ENSAPLG00000007330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040068

21046214 - 21072784

26571

ENSAPLT00000007619

21058537 - 21072784

14248