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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21059785_21059908_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21059785 - 21059908

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

GGGCTGGTGACG

Flanking Amino Acid:

FTKSVVKQMRAQPPFTMCFR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.7

44.5

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

76.4

0.59

0.9

69.7

36.7

Minor 5ss

40.7

-1

2.9

49.5

46.5

Minor BPS

35.7

-1.2

2.4

36.54

39.4

Associated Gene:

Gene:

FRMD5

Ensembl Gene ID:

ENSAPLG00000007330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040068

21046214 - 21072784

26571

ENSAPLT00000007619

21058537 - 21072784

14248