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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21062355_21063355_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21062355 - 21063355

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

GGCCACTCATCG

Flanking Amino Acid:

AALLAAYILQAEIGDYDPGK

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

75.3

40.4

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

71.9

0.49

0.8

62.4

34.6

Minor 5ss

36.8

-1.5

3.5

56.4

47.8

Minor BPS

40.5

-0.8

1.9

40.14

42.8

Associated Gene:

Gene:

FRMD5

Ensembl Gene ID:

ENSAPLG00000007330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040068

21046214 - 21072784

26571

ENSAPLT00000007619

21058537 - 21072784

14248