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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21066245_21066576_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21066245 - 21066576

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCCT

U12 Branch Point Sequence:

TTGTCCTTGTCC

Flanking Amino Acid:

QGNKRVHFIKWNEVTKMKFE

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

33.6

-1

4.3

71.4

45.1

Major PPT

83.3

0.75

0.8

77.1

31.6

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

49.6

-0

3.5

77.58

Associated Gene:

Gene:

FRMD5

Ensembl Gene ID:

ENSAPLG00000007330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040068

21046214 - 21072784

26571

ENSAPLT00000007619

21058537 - 21072784

14248