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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21066641_21067250_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21066641 - 21067250

Intron Length:

610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

TCCCCGTGGACT

Flanking Amino Acid:

TFYLYVSQKEEKKIVLTYFA

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

64.9

0.37

29.8

Major PPT

0.83

0.6

86.1

20.7

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

46.3

-0.2

2.2

65.23

45.4

Associated Gene:

Gene:

FRMD5

Ensembl Gene ID:

ENSAPLG00000007330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007619

21058537 - 21072784

14248

ENSAPLT00000040068

21046214 - 21072784

26571