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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21067343_21068468_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21067343 - 21068468

Intron Length:

1126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CGGTGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

GGGCGCTCACGC

Flanking Amino Acid:

KCGIENQAFYKLEKSSQVRT

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

73.9

29.7

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

69.9

0.45

61.7

Minor 5ss

29.2

-2.4

3.1

32.8

35.7

Minor BPS

34.8

-1.1

2.1

37.36

Associated Gene:

Gene:

FRMD5

Ensembl Gene ID:

ENSAPLG00000007330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040068

21046214 - 21072784

26571

ENSAPLT00000007619

21058537 - 21072784

14248